Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03515 | Not Available | - | 3683143 - 3684630 | 54868.7 |
| l-ribulose-5-phosphate 4-epimerase arad | GGADHKLB_03516 | Q9S469 | - | 3684656 - 3685357 | 25973.6 |
| xylulose kinase | GGADHKLB_03517 | C5A1M3 | - | 3685379 - 3686974 | 57753.1 |
| l-arabinose isomerase | GGADHKLB_03518 | Q9S467 | - | 3687010 - 3688509 | 56442.5 |
| hth-type transcriptional activator rhar | GGADHKLB_03519 | P19219 | + | 3688721 - 3689764 | 40673.3 |
| hypothetical protein | GGADHKLB_03520 | Not Available | - | 3689817 - 3690257 | 17387.5 |
| hypothetical protein | GGADHKLB_03521 | Not Available | - | 3690424 - 3690543 | 4275.22 |
| hypothetical protein | GGADHKLB_03522 | G3XP38 | - | 3690534 - 3691814 | 46020.1 |
| d-galactose-binding periplasmic protein | GGADHKLB_03523 | P23905 | - | 3691852 - 3692910 | 38293.5 |
| hypothetical protein | GGADHKLB_03524 | Not Available | - | 3692923 - 3693912 | 36763.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.