Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03505 | Not Available | - | 3671548 - 3672576 | 39679.1 |
| deoxyguanosinetriphosphate triphosphohydrolase | GGADHKLB_03506 | Q927I2 | - | 3672640 - 3674067 | 55049.8 |
| hypothetical protein | GGADHKLB_03507 | Not Available | - | 3674096 - 3675148 | 40546.8 |
| beta-galactosidase | GGADHKLB_03508 | Q03WL0 | - | 3675271 - 3677016 | 67770.1 |
| 4'-phosphopantetheinyl transferase sfp | GGADHKLB_03509 | P39135 | - | 3677036 - 3677659 | 24276.2 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | GGADHKLB_03510 | Q9WYH8 | + | 3677906 - 3678919 | 37055.1 |
| 3-dehydroquinate synthase | GGADHKLB_03511 | A6M255 | + | 3678932 - 3679993 | 39089.5 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | GGADHKLB_03512 | Q9X248 | + | 3680010 - 3680753 | 26488.2 |
| hypothetical protein | GGADHKLB_03513 | Q8DRZ4 | - | 3680851 - 3681882 | 36368.8 |
| hth-type transcriptional activator cmpr | GGADHKLB_03514 | A0T0V5 | + | 3682039 - 3682923 | 33489.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.