Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| v-type sodium atpase subunit k | GGADHKLB_03495 | P43457 | - | 3661933 - 3662418 | 16004.2 |
| hypothetical protein | GGADHKLB_03496 | P43439 | - | 3662415 - 3664436 | 74503.4 |
| hypothetical protein | GGADHKLB_03497 | Not Available | - | 3664486 - 3664794 | 10947.9 |
| trna (cytidine(34)-2'-o)-methyltransferase | GGADHKLB_03498 | Q721N0 | - | 3664944 - 3665435 | 18639.5 |
| thiamine-monophosphate kinase | GGADHKLB_03499 | Q58089 | - | 3665531 - 3666436 | 32705.3 |
| hypothetical protein | GGADHKLB_03500 | O34611 | - | 3666459 - 3668036 | 58472.4 |
| hypothetical protein | GGADHKLB_03501 | Not Available | - | 3668067 - 3668171 | 3908.29 |
| endonuclease iii | GGADHKLB_03502 | P73715 | - | 3668199 - 3668825 | 24159.2 |
| hypothetical protein | GGADHKLB_03503 | O58549 | - | 3668822 - 3670588 | 69684.1 |
| pp_03428 | GGADHKLB_03504 | Not Available | - | 3671047 - 3671520 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.