Clostridium scindens

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
Species[Clostridium] scindens
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatcecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementChains; Chains, Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium scindens

Accession NumberCP113781.1

Gene Summary

Adenine Count

1027942 bp

Thymine Count

1059284 bp

Guanine Count

939860 bp

Cytosine Count

955966 bp

Genome Length

3983052 bp

Protein-coding Genes

3637 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
putative mfs-type transporter yhjxGGADHKLB_03485P37662-3651997 - 365320842711.5
udp-n-acetylglucosamine 1-carboxyvinyltransferase 2GGADHKLB_03486Q8R6V0-3653289 - 365458146317.2
shikimate kinaseGGADHKLB_03487C0QR76-3654723 - 365522318590.6
hypothetical proteinGGADHKLB_03488Not Available-3655350 - 365570614643.5
v-type sodium atpase subunit dGGADHKLB_03489A3DHP2-3655923 - 365658224887.5
v-type sodium atpase subunit bGGADHKLB_03490Q184E3-3656810 - 365818350686.9
v-type sodium atpase catalytic subunit aGGADHKLB_03491A3DHP0-3658186 - 365995265278.4
v-type sodium atpase subunit gGGADHKLB_03492Q8RI76-3659980 - 366030011334.5
v-type sodium atpase subunit cGGADHKLB_03493P43456-3660293 - 366126136199.2
v-type proton atpase subunit eGGADHKLB_03494A7FWR0-3661286 - 366187921832.1

Displaying genes 3481 – 3490 of 3781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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