Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03455 | C5FYJ7 | - | 3622122 - 3623945 | 68098.8 |
| hypothetical protein | GGADHKLB_03456 | Not Available | - | 3623942 - 3624298 | 14022.7 |
| hypothetical protein | GGADHKLB_03457 | Not Available | - | 3624252 - 3624743 | 18934.6 |
| hypothetical protein | GGADHKLB_03458 | Not Available | - | 3624886 - 3625035 | 5757.31 |
| hypothetical protein | GGADHKLB_03459 | Not Available | - | 3625060 - 3626001 | 36149.9 |
| ecf rna polymerase sigma factor sigm | GGADHKLB_03460 | O07582 | - | 3626002 - 3626511 | 20092.1 |
| hypothetical protein | GGADHKLB_03461 | Q5WNW9 | - | 3626652 - 3627104 | 17180.4 |
| is1595 family transposase isclph1 | GGADHKLB_03462 | Not Available | - | 3627249 - 3627560 | 11790.0 |
| cinnamate reductase | GGADHKLB_03463 | G9F1Y9 | - | 3627634 - 3629571 | 70489.5 |
| hth-type transcriptional activator rhas | GGADHKLB_03464 | P05052 | + | 3629826 - 3631058 | 47107.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.