Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| energy-coupling factor transporter atp-binding protein ecfa3 | GGADHKLB_03445 | Q58488 | - | 3614297 - 3615121 | 30685.9 |
| energy-coupling factor transporter atp-binding protein ecfa2 | GGADHKLB_03446 | Q9V1Q4 | - | 3615134 - 3615979 | 31149.7 |
| energy-coupling factor transporter transmembrane protein ecft | GGADHKLB_03447 | P70972 | - | 3615964 - 3616761 | 30145.3 |
| hypothetical protein | GGADHKLB_03448 | Not Available | - | 3616794 - 3617414 | 21755.5 |
| chaperone protein dnaj | GGADHKLB_03449 | A9KKT9 | + | 3617742 - 3618716 | 35186.4 |
| d-alanyl-d-alanine dipeptidase | GGADHKLB_03450 | Q7VG78 | - | 3618791 - 3619951 | 44959.2 |
| hypothetical protein | GGADHKLB_03451 | Not Available | - | 3620067 - 3620354 | 10879.6 |
| hypothetical protein | GGADHKLB_03452 | Q5WNW9 | + | 3620508 - 3620789 | 10515.6 |
| hypothetical protein | GGADHKLB_03453 | Q5WNW9 | - | 3620821 - 3621330 | 18579.9 |
| hypothetical protein | GGADHKLB_03454 | Not Available | - | 3621510 - 3622028 | 19270.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.