Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination protein nusg | GGADHKLB_03435 | Q9KGE7 | - | 3604276 - 3604791 | 19258.3 |
| protein translocase subunit sece | GGADHKLB_03436 | Not Available | - | 3604825 - 3605016 | 7111.94 |
| hypothetical protein | GGADHKLB_03437 | Q12BV1 | - | 3605382 - 3606122 | 28533.9 |
| hypothetical protein | GGADHKLB_03438 | Not Available | - | 3606119 - 3606868 | 28436.8 |
| 5-methylthioadenosine/s-adenosylhomocysteine deaminase | GGADHKLB_03439 | Q5JER0 | - | 3606896 - 3608380 | 56126.2 |
| purine catabolism regulatory protein | GGADHKLB_03440 | O32138 | - | 3608393 - 3610009 | 62502.5 |
| allantoinase | GGADHKLB_03441 | Q1J391 | - | 3610014 - 3611336 | 48015.9 |
| hypothetical protein | GGADHKLB_03442 | Q58515 | - | 3611339 - 3612127 | 28990.2 |
| putative sugar kinase ydjh | GGADHKLB_03443 | Q5JEK6 | - | 3612124 - 3613104 | 36013.2 |
| glutamine--fructose-6-phosphate aminotransferase (isomerizing) | GGADHKLB_03444 | Q8TZ14 | - | 3613117 - 3614307 | 44086.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.