Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerol kinase | GGADHKLB_03415 | Q3AB25 | - | 3583248 - 3584726 | 53671.9 |
| ribokinase | GGADHKLB_03416 | O60116 | - | 3584757 - 3585641 | 31731.1 |
| d-ribose pyranase | GGADHKLB_03417 | A4IT64 | - | 3585699 - 3586100 | 14703.0 |
| ribose import permease protein rbsc | GGADHKLB_03418 | P36948 | - | 3586141 - 3587193 | 36586.0 |
| ribose import atp-binding protein rbsa | GGADHKLB_03419 | Q7UU57 | - | 3587197 - 3588753 | 57848.4 |
| hypothetical protein | GGADHKLB_03420 | Not Available | - | 3588786 - 3589439 | 23144.4 |
| hypothetical protein | GGADHKLB_03421 | Q2JZQ5 | - | 3589584 - 3590609 | 36098.6 |
| apulose-4-phosphate transketolase subunit b | GGADHKLB_03422 | A6KXB3 | - | 3590681 - 3591613 | 32874.4 |
| apulose-4-phosphate transketolase subunit a | GGADHKLB_03423 | A6KXB4 | - | 3591606 - 3592439 | 30378.2 |
| hypothetical protein | GGADHKLB_03424 | Not Available | - | 3592442 - 3593842 | 51962.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.