Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diacetylchitobiose uptake system permease protein dasc | GGADHKLB_03405 | Q9K489 | - | 3567434 - 3568276 | 30963.7 |
| hypothetical protein | GGADHKLB_03406 | O51924 | - | 3568273 - 3569178 | 33633.2 |
| hypothetical protein | GGADHKLB_03407 | Q9V297 | - | 3569206 - 3570549 | 50230.9 |
| putative response regulatory protein | GGADHKLB_03408 | Q6GK93 | + | 3570819 - 3571565 | 28469.2 |
| hypothetical protein | GGADHKLB_03409 | O31516 | + | 3571562 - 3573274 | 65410.7 |
| hypothetical protein | GGADHKLB_03410 | Q8X8Q3 | - | 3573353 - 3574204 | 32785.0 |
| dna-directed rna polymerase subunit beta' | GGADHKLB_03411 | A9KJL3 | - | 3574343 - 3577975 | 135116.0 |
| dna-directed rna polymerase subunit beta | GGADHKLB_03412 | A3DIZ4 | - | 3577990 - 3581865 | 145500.0 |
| hypothetical protein | GGADHKLB_03413 | Not Available | - | 3582245 - 3582583 | 12429.8 |
| hypothetical protein | GGADHKLB_03414 | O34647 | + | 3582847 - 3583065 | 8631.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.