Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03395 | Not Available | - | 3559162 - 3559659 | 18305.7 |
| hypothetical protein | GGADHKLB_03396 | Not Available | - | 3559673 - 3560236 | 20917.3 |
| putative membrane transporter protein yfca | GGADHKLB_03397 | P29942 | + | 3560407 - 3561168 | 26523.5 |
| putative peptidase | GGADHKLB_03398 | Q8NW55 | - | 3561165 - 3562256 | 41162.1 |
| hypothetical protein | GGADHKLB_03399 | Not Available | - | 3562373 - 3562561 | 6278.01 |
| fe(2+) transporter feob | GGADHKLB_03400 | Q7MV19 | - | 3562584 - 3564767 | 78800.5 |
| hypothetical protein | GGADHKLB_03401 | Q7MV19 | - | 3564790 - 3565011 | 8127.14 |
| hypothetical protein | GGADHKLB_03402 | Q57987 | - | 3565027 - 3565239 | 7734.55 |
| hypothetical protein | GGADHKLB_03403 | Not Available | - | 3565407 - 3566375 | 37791.9 |
| inositol 2-dehydrogenase | GGADHKLB_03404 | O05389 | - | 3566377 - 3567408 | 38537.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.