Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03375 | P44994 | - | 3535981 - 3536469 | 18494.2 |
| hypothetical protein | GGADHKLB_03376 | P44992 | - | 3536466 - 3537506 | 38895.6 |
| xylulose kinase | GGADHKLB_03377 | P12011 | - | 3537517 - 3538938 | 53129.9 |
| l-threonine 3-dehydrogenase | GGADHKLB_03378 | Q15SS1 | - | 3538974 - 3539990 | 36523.4 |
| hypothetical protein | GGADHKLB_03379 | O05494 | - | 3540208 - 3540915 | 27961.7 |
| uracil permease | GGADHKLB_03380 | A0A2A5K1W4 | - | 3540932 - 3542194 | 44336.0 |
| xylulose kinase | GGADHKLB_03381 | P09099 | - | 3543101 - 3544558 | 53396.2 |
| hypothetical protein | GGADHKLB_03382 | Not Available | - | 3544654 - 3546138 | 55082.9 |
| hypothetical protein | GGADHKLB_03383 | Not Available | - | 3546175 - 3546792 | 22517.9 |
| hth-type transcriptional activator rhar | GGADHKLB_03384 | Q5HJR8 | - | 3546967 - 3547806 | 33241.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.