Clostridium scindens

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
Species[Clostridium] scindens
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatcecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementChains; Chains, Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium scindens

Accession NumberCP113781.1

Gene Summary

Adenine Count

1027942 bp

Thymine Count

1059284 bp

Guanine Count

939860 bp

Cytosine Count

955966 bp

Genome Length

3983052 bp

Protein-coding Genes

3637 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinGGADHKLB_03365P40714-3524873 - 352632156252.1
putative hth-type transcriptional repressor exurGGADHKLB_03366Q9JMQ1+3526600 - 352765539646.5
hypothetical proteinGGADHKLB_03367Not Available+3527678 - 352830123187.5
hypothetical proteinGGADHKLB_03368O67304-3528364 - 353010361070.2
hypothetical proteinGGADHKLB_03369Not Available-3530151 - 353067520087.2
glyoxylate/hydroxypyruvate reductase bGGADHKLB_03370Q58424-3530865 - 353182434221.1
6-phosphogluconate dehydrogenase, decarboxylatingGGADHKLB_03371Q931R3-3531840 - 353323751069.2
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenaseGGADHKLB_03372Q05528-3533248 - 353401527586.2
putative khg/kdpg aldolaseGGADHKLB_03373O83578-3534038 - 353466122500.6
c4-dicarboxylate trap transporter large permease protein dctmGGADHKLB_03374Q312S1-3534698 - 353597844880.4

Displaying genes 3361 – 3370 of 3781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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