Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative protein yhaz | GGADHKLB_03355 | O07541 | - | 3515727 - 3516800 | 41411.3 |
| hypothetical protein | GGADHKLB_03356 | Not Available | + | 3517074 - 3517496 | 15297.2 |
| aurachin b dehydrogenase | GGADHKLB_03357 | Q60A54 | - | 3517513 - 3518502 | 36899.6 |
| hypothetical protein | GGADHKLB_03358 | P46330 | + | 3518658 - 3519239 | 21808.4 |
| ribose-5-phosphate isomerase b | GGADHKLB_03359 | P37351 | - | 3519250 - 3519690 | 15862.1 |
| sugar phosphatase ybiv | GGADHKLB_03360 | P75792 | + | 3519787 - 3520569 | 28524.1 |
| hypothetical protein | GGADHKLB_03361 | Not Available | - | 3520633 - 3521742 | 42268.8 |
| diacetylchitobiose uptake system permease protein ngcg | GGADHKLB_03362 | O50501 | - | 3521770 - 3522597 | 30414.1 |
| melibiose/raffinose/stachyose import permease protein meld | GGADHKLB_03363 | O32155 | - | 3522594 - 3523523 | 35158.0 |
| hypothetical protein | GGADHKLB_03364 | O58969 | - | 3523592 - 3524860 | 47733.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.