Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative khg/kdpg aldolase | GGADHKLB_03345 | O83578 | + | 3502973 - 3503608 | 22542.6 |
| hydroxypyruvate reductase | GGADHKLB_03346 | Q58424 | + | 3503647 - 3504600 | 33859.9 |
| hth-type transcriptional regulator beti | GGADHKLB_03347 | O34643 | - | 3504655 - 3505242 | 22425.9 |
| nadh oxidase | GGADHKLB_03348 | P32382 | + | 3505474 - 3507390 | 69469.6 |
| xylulose kinase | GGADHKLB_03349 | P46834 | - | 3507483 - 3509006 | 55725.3 |
| hth-type transcriptional repressor nagr | GGADHKLB_03350 | O34817 | - | 3509021 - 3509788 | 29622.8 |
| putative zinc-type alcohol dehydrogenase-like protein yjmd | GGADHKLB_03351 | Q15SS1 | + | 3510064 - 3511098 | 37434.5 |
| hypothetical protein | GGADHKLB_03352 | Q6K7V6 | - | 3511152 - 3512051 | 34452.8 |
| cytochrome b6-f complex iron-sulfur subunit | GGADHKLB_03353 | O07622 | - | 3512048 - 3513421 | 50957.8 |
| hypothetical protein | GGADHKLB_03354 | P77334 | + | 3513673 - 3515637 | 75124.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.