Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00199 | P14176 | - | 213364 - 215223 | 68276.1 |
| hypothetical protein | GGADHKLB_00200 | P13669 | - | 215265 - 215882 | 22848.4 |
| catalase | GGADHKLB_00201 | P45737 | - | 216010 - 217515 | 57366.3 |
| sensor histidine kinase rcsc | GGADHKLB_00202 | Q7MD16 | - | 217691 - 221497 | 141967.0 |
| hypothetical protein | GGADHKLB_00203 | Not Available | - | 221681 - 224263 | 87938.6 |
| protein-glutamate methylesterase/protein-glutamine glutaminase | GGADHKLB_00204 | O31517 | + | 224584 - 226197 | 62525.1 |
| hypothetical protein | GGADHKLB_00205 | P0AA94 | + | 226208 - 227233 | 39225.7 |
| fructose import atp-binding protein fruk | GGADHKLB_00206 | Q9KAG5 | + | 227230 - 228693 | 56580.0 |
| abc transporter periplasmic-binding protein yphf | GGADHKLB_00207 | P77269 | + | 228787 - 229779 | 35476.8 |
| ribose import atp-binding protein rbsa | GGADHKLB_00208 | Q891M1 | + | 229866 - 231350 | 54947.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.