Clostridium scindens

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
Species[Clostridium] scindens
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatcecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementChains; Chains, Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium scindens

Accession NumberCP113781.1

Gene Summary

Adenine Count

1027942 bp

Thymine Count

1059284 bp

Guanine Count

939860 bp

Cytosine Count

955966 bp

Genome Length

3983052 bp

Protein-coding Genes

3637 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
l-fucose isomeraseGGADHKLB_03285Q7MJI2-3433378 - 343479952872.1
3-oxo-tetronate 4-phosphate decarboxylaseGGADHKLB_03286P0DTQ0-3434810 - 343548424993.9
alcohol dehydrogenaseGGADHKLB_03287P14940-3435499 - 343654538629.1
rhamnulokinaseGGADHKLB_03288Q8A1A3-3436559 - 343804056032.2
l-rhamnulokinaseGGADHKLB_03289Q8A1A3-3438061 - 343952454855.7
putative sugar kinase ydjhGGADHKLB_03290P77493-3439537 - 344050835239.4
putative zinc-type alcohol dehydrogenase-like protein ydjjGGADHKLB_03291P77280-3440525 - 344155336736.8
oligosaccharides import atp-binding protein msmxGGADHKLB_03292P94360-3441622 - 344273141451.4
l-fucose isomeraseGGADHKLB_03293Q64ZS4-3442749 - 344454266058.6
galactitol 2-dehydrogenaseGGADHKLB_03294P87219-3444563 - 344532727140.8

Displaying genes 3281 – 3290 of 3781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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