Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate transport system permease protein ugpa | GGADHKLB_03265 | O32155 | - | 3415562 - 3416464 | 33784.5 |
| hypothetical protein | GGADHKLB_03266 | Q578M8 | - | 3416584 - 3417879 | 47094.1 |
| Trna-glu | Not Available | Not Available | + | 3418268 - 3418339 | Not Available |
| hypothetical protein | GGADHKLB_03268 | O34383 | - | 3418417 - 3419790 | 50039.6 |
| diacylglycerol kinase | GGADHKLB_03269 | O31502 | - | 3419806 - 3420771 | 36275.4 |
| hpr-like protein crh | GGADHKLB_03270 | Q9K708 | - | 3420860 - 3421117 | 9446.55 |
| putative cell division protein whia | GGADHKLB_03271 | A9KSS5 | - | 3421134 - 3422015 | 33005.2 |
| nucleotide-binding protein yvcj | GGADHKLB_03272 | C4ZEG8 | - | 3422025 - 3422906 | 33290.5 |
| udp-n-acetylenolpyruvoylglucosamine reductase | GGADHKLB_03273 | C4ZEG7 | - | 3422908 - 3423819 | 33212.3 |
| hypothetical protein | GGADHKLB_03274 | O07585 | + | 3423974 - 3425254 | 47929.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.