Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03255 | Q8Z5R0 | - | 3404987 - 3406921 | 73670.1 |
| protein lacx, plasmid | GGADHKLB_03256 | P42096 | - | 3407064 - 3407936 | 33613.8 |
| hypothetical protein | GGADHKLB_03257 | A0A6M7H989 | - | 3407952 - 3408638 | 26118.9 |
| hth-type transcriptional regulator murr | GGADHKLB_03258 | P26833 | - | 3408684 - 3409532 | 31431.6 |
| putative fructose-bisphosphate aldolase | GGADHKLB_03259 | A6TEF4 | - | 3409557 - 3410417 | 30604.8 |
| hypothetical protein | GGADHKLB_03260 | Q58999 | - | 3410547 - 3411863 | 49482.1 |
| fructose-bisphosphate aldolase | GGADHKLB_03261 | Q5HM97 | - | 3411882 - 3412742 | 31243.7 |
| putative hth-type transcriptional regulator ydjf | GGADHKLB_03262 | O05261 | + | 3412878 - 3413669 | 29641.6 |
| putative sugar kinase ydjh | GGADHKLB_03263 | P77493 | - | 3413659 - 3414663 | 36534.2 |
| inner membrane abc transporter permease protein ycjp | GGADHKLB_03264 | P77716 | - | 3414723 - 3415559 | 31328.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.