Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | + | 3397694 - 3397767 | Not Available |
| Trna-gly | Not Available | Not Available | + | 3397837 - 3397907 | Not Available |
| Trna-pro | Not Available | Not Available | + | 3397915 - 3397989 | Not Available |
| putative metallophosphoesterase mg207 | GGADHKLB_03248 | O27802 | - | 3398100 - 3398579 | 18294.7 |
| ditp/xtp pyrophosphatase | GGADHKLB_03249 | Q8XI68 | - | 3398600 - 3399226 | 22928.5 |
| ribosomal rna large subunit methyltransferase l | GGADHKLB_03250 | P50840 | - | 3399244 - 3400398 | 44056.7 |
| hypothetical protein | GGADHKLB_03251 | Not Available | - | 3400589 - 3400831 | 8520.8 |
| hypothetical protein | GGADHKLB_03252 | Not Available | - | 3401097 - 3401555 | 17032.8 |
| glutamine synthetase | GGADHKLB_03253 | Q54WR9 | - | 3401705 - 3403816 | 77666.5 |
| fructose-bisphosphate aldolase | GGADHKLB_03254 | P75089 | - | 3404003 - 3404866 | 30643.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.