Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03235 | Not Available | - | 3389441 - 3390379 | 35069.5 |
| hypothetical protein | GGADHKLB_03236 | Q60349 | - | 3390404 - 3391330 | 33626.7 |
| energy-coupling factor transporter atp-binding protein ecfa1 | GGADHKLB_03237 | Q60350 | - | 3391348 - 3392070 | 26410.2 |
| hypothetical protein | GGADHKLB_03238 | Not Available | - | 3392192 - 3393796 | 61105.8 |
| transcriptional regulatory protein natr | GGADHKLB_03239 | P70955 | - | 3393793 - 3394497 | 27138.5 |
| Trna-leu | Not Available | Not Available | + | 3394847 - 3394926 | Not Available |
| hypothetical protein | GGADHKLB_03241 | Q46508 | - | 3395076 - 3397202 | 79022.0 |
| Trna-lys | Not Available | Not Available | + | 3397381 - 3397453 | Not Available |
| Trna-gln | Not Available | Not Available | + | 3397463 - 3397534 | Not Available |
| Trna-his | Not Available | Not Available | + | 3397550 - 3397623 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.