Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adaptive-response sensory-kinase sasa | GGADHKLB_03224 | O34989 | + | 3379601 - 3381001 | 51115.4 |
| proton/sodium-dicarboxylate symport protein | GGADHKLB_03225 | P24943 | - | 3380976 - 3382211 | 43211.5 |
| l-serine dehydratase, alpha chain | GGADHKLB_03227 | O34607 | - | 3382256 - 3383125 | 30373.9 |
| l-serine dehydratase, beta chain | GGADHKLB_03228 | O34635 | - | 3383151 - 3383822 | 23916.1 |
| hypothetical protein | GGADHKLB_03229 | Not Available | + | 3383969 - 3385087 | 42480.3 |
| Trna-leu | Not Available | Not Available | + | 3385218 - 3385300 | Not Available |
| hypothetical protein | GGADHKLB_03231 | P96690 | + | 3385415 - 3386227 | 31591.7 |
| is4 family transposase is1675 | GGADHKLB_03232 | P03835 | - | 3386409 - 3387740 | 51335.2 |
| hypothetical protein | GGADHKLB_03233 | O29998 | + | 3388005 - 3388481 | 17853.9 |
| hypothetical protein | GGADHKLB_03234 | Not Available | + | 3388595 - 3389494 | 33860.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.