Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase (nadp(+)) | GGADHKLB_03214 | Q97X13 | + | 3371612 - 3372598 | 36953.4 |
| inner membrane permease ygbn | GGADHKLB_03215 | Q46892 | + | 3372633 - 3373970 | 45986.0 |
| hth-type transcriptional repressor nanr | GGADHKLB_03216 | P42239 | - | 3374038 - 3374739 | 26132.4 |
| gluconate 5-dehydrogenase | GGADHKLB_03217 | P50199 | + | 3374875 - 3375654 | 27687.5 |
| hypothetical protein | GGADHKLB_03218 | Not Available | + | 3375671 - 3376195 | 20299.3 |
| hypothetical protein | GGADHKLB_03219 | Not Available | - | 3376192 - 3376485 | 10599.5 |
| hypothetical protein | GGADHKLB_03220 | Not Available | - | 3376500 - 3377270 | 28437.2 |
| hypothetical protein | GGADHKLB_03221 | Not Available | - | 3377267 - 3377965 | 25174.9 |
| bacitracin transport atp-binding protein bcra | GGADHKLB_03222 | P42332 | - | 3377962 - 3378717 | 27628.9 |
| transcriptional regulatory protein walr | GGADHKLB_03223 | P94504 | + | 3378896 - 3379597 | 26106.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.