Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | GGADHKLB_03204 | O34340 | - | 3362449 - 3363687 | 43564.0 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | GGADHKLB_03205 | Q5HGK2 | - | 3363701 - 3364441 | 25838.1 |
| malonyl coa-acyl carrier protein transacylase | GGADHKLB_03206 | P71019 | - | 3364435 - 3365355 | 32868.9 |
| nadh:quinone reductase | GGADHKLB_03207 | P71847 | - | 3365348 - 3366286 | 33216.6 |
| acyl carrier protein | GGADHKLB_03208 | Q5HPV9 | - | 3366309 - 3366536 | 8346.79 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 | GGADHKLB_03209 | Q97DA2 | - | 3366595 - 3367581 | 35613.5 |
| signal peptidase i t | GGADHKLB_03210 | P73157 | + | 3367853 - 3368380 | 19737.7 |
| hypothetical protein | GGADHKLB_03211 | O28720 | - | 3368399 - 3369295 | 32645.2 |
| hth-type transcriptional activator rhas | GGADHKLB_03212 | O31449 | + | 3369530 - 3370414 | 33892.1 |
| hypothetical protein | GGADHKLB_03213 | O31448 | + | 3370411 - 3371340 | 33986.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.