Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtpase der | GGADHKLB_03194 | A5CY46 | + | 3353133 - 3354353 | 44116.4 |
| hypothetical protein | GGADHKLB_03195 | Not Available | + | 3354454 - 3355053 | 22804.6 |
| nad-dependent protein deacetylase | GGADHKLB_03196 | Q97MB4 | - | 3355058 - 3355786 | 26676.8 |
| beta-phosphoglucomutase | GGADHKLB_03197 | Q9X0Y1 | - | 3355835 - 3356488 | 24536.5 |
| hypothetical protein | GGADHKLB_03198 | Q796S4 | - | 3356680 - 3357135 | 17388.8 |
| hypothetical protein | GGADHKLB_03199 | Q2FIF3 | - | 3357179 - 3358246 | 38319.3 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta, chloroplastic | GGADHKLB_03200 | Q899N5 | - | 3358257 - 3360023 | 64959.6 |
| biotin carboxylase | GGADHKLB_03201 | P49787 | - | 3360036 - 3361370 | 49042.8 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | GGADHKLB_03202 | A0PXC3 | - | 3361380 - 3361808 | 15579.1 |
| biotin carboxyl carrier protein of acetyl-coa carboxylase | GGADHKLB_03203 | P49786 | - | 3361934 - 3362422 | 17067.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.