Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-proline reductase proprotein prda | GGADHKLB_00189 | Q9Z4P6 | + | 202931 - 203416 | 17731.3 |
| hypothetical protein | GGADHKLB_00190 | Q57897 | + | 203422 - 204051 | 23299.1 |
| dna helicase iv | GGADHKLB_00191 | O32215 | + | 204119 - 206185 | 80187.3 |
| dna topoisomerase 3 | GGADHKLB_00192 | Q65N90 | - | 206249 - 208459 | 83418.3 |
| Trna-glu | Not Available | Not Available | + | 208667 - 208738 | Not Available |
| Trna-cys | Not Available | Not Available | + | 208768 - 208838 | Not Available |
| inositol 2-dehydrogenase/d-chiro-inositol 3-dehydrogenase | GGADHKLB_00195 | O05389 | - | 208968 - 210143 | 43767.4 |
| hth-type transcriptional regulator gltc | GGADHKLB_00196 | P37499 | + | 210280 - 211155 | 33098.1 |
| shikimate dehydrogenase (nadp(+)) | GGADHKLB_00197 | Q723F9 | - | 211168 - 212037 | 31290.7 |
| glycine betaine/carnitine transport atp-binding protein gbua | GGADHKLB_00198 | Q9RR46 | - | 212164 - 213345 | 43249.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.