Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twitching mobility protein | GGADHKLB_03184 | P24559 | - | 3341940 - 3342989 | 38772.7 |
| hypothetical protein | GGADHKLB_03185 | Q1D098 | - | 3343014 - 3344696 | 62786.0 |
| hypothetical protein | GGADHKLB_03186 | Not Available | - | 3344708 - 3345412 | 26282.8 |
| hypothetical protein | GGADHKLB_03187 | Not Available | - | 3345393 - 3346886 | 55156.1 |
| type ii secretion system protein f | GGADHKLB_03188 | P31705 | - | 3346901 - 3348100 | 44294.9 |
| type 4 prepilin-like proteins leader peptide-processing enzyme | GGADHKLB_03189 | P72640 | - | 3348143 - 3348916 | 27848.7 |
| hypothetical protein | GGADHKLB_03190 | Not Available | - | 3349012 - 3349467 | 17646.1 |
| hypothetical protein | GGADHKLB_03191 | Not Available | - | 3349510 - 3349950 | 15711.9 |
| [fefe] hydrogenase maturase subunit hyde | GGADHKLB_03192 | Q9X0Z6 | + | 3350588 - 3351637 | 39850.1 |
| biotin synthase | GGADHKLB_03193 | Q9S498 | + | 3351673 - 3353094 | 54014.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.