Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03174 | Not Available | + | 3322386 - 3323147 | 29905.3 |
| vitamin b12 import atp-binding protein btud | GGADHKLB_03175 | P94374 | + | 3323131 - 3324018 | 33011.5 |
| hypothetical protein | GGADHKLB_03176 | Not Available | + | 3324005 - 3325216 | 45564.5 |
| protein-adp-ribose hydrolase | GGADHKLB_03177 | Q93RG0 | - | 3325235 - 3326038 | 30430.4 |
| hypothetical protein | GGADHKLB_03178 | Q8TTH3 | - | 3326048 - 3326548 | 18896.6 |
| dna mismatch repair protein muts | GGADHKLB_03179 | C1L2V9 | - | 3326563 - 3328221 | 63476.9 |
| hypothetical protein | GGADHKLB_03180 | Not Available | - | 3328327 - 3329529 | 44868.9 |
| hypothetical protein | GGADHKLB_03181 | Not Available | - | 3329562 - 3329978 | 15979.2 |
| hypothetical protein | GGADHKLB_03182 | Not Available | - | 3329994 - 3330647 | 24683.1 |
| hypothetical protein | GGADHKLB_03183 | Not Available | - | 3330701 - 3341911 | 400645.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.