Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| folylpolyglutamate synthase | GGADHKLB_03164 | Q05865 | - | 3306063 - 3307388 | 49140.0 |
| hypothetical protein | GGADHKLB_03165 | P72302 | - | 3307390 - 3309594 | 83702.8 |
| valine--trna ligase | GGADHKLB_03166 | Q8XJ42 | - | 3309610 - 3312261 | 102518.0 |
| hypothetical protein | GGADHKLB_03167 | Not Available | - | 3312681 - 3314855 | 75475.6 |
| hypothetical protein | GGADHKLB_03168 | Not Available | + | 3315132 - 3316115 | 34585.8 |
| hypothetical protein | GGADHKLB_03169 | Not Available | - | 3316194 - 3318407 | 77725.2 |
| hypothetical protein | GGADHKLB_03170 | Not Available | - | 3318602 - 3319849 | 47935.9 |
| hypothetical protein | GGADHKLB_03171 | O28836 | + | 3320164 - 3320703 | 19808.5 |
| hypothetical protein | GGADHKLB_03172 | P56949 | - | 3320711 - 3321685 | 35247.7 |
| ecf rna polymerase sigma factor sigw | GGADHKLB_03173 | Q45585 | + | 3321857 - 3322408 | 21559.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.