Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stage v sporulation protein ad | GGADHKLB_03154 | P40869 | - | 3300218 - 3301177 | 34011.9 |
| hypothetical protein | GGADHKLB_03155 | P40868 | - | 3301224 - 3301703 | 17106.2 |
| hypothetical protein | GGADHKLB_03156 | P40867 | - | 3301711 - 3302127 | 15065.0 |
| hypothetical protein | GGADHKLB_03157 | P40866 | - | 3302087 - 3302761 | 25013.2 |
| hypothetical protein | GGADHKLB_03158 | Not Available | - | 3302764 - 3302919 | 5648.01 |
| rna polymerase sigma-f factor | GGADHKLB_03159 | P26764 | - | 3302992 - 3303705 | 27586.3 |
| anti-sigma f factor | GGADHKLB_03160 | B0K9G3 | - | 3303684 - 3304139 | 16956.2 |
| anti-sigma f factor antagonist | GGADHKLB_03161 | P26777 | - | 3304140 - 3304451 | 12150.8 |
| cell division coordinator cpob | GGADHKLB_03162 | Not Available | - | 3304539 - 3305915 | 51240.3 |
| hypothetical protein | GGADHKLB_03163 | Not Available | - | 3305936 - 3306070 | 5308.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.