Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| corrinoid adenosyltransferase | GGADHKLB_03144 | P0A9H6 | - | 3290839 - 3291363 | 19655.9 |
| hypothetical protein | GGADHKLB_03145 | Not Available | - | 3291500 - 3292564 | 36375.3 |
| hypothetical protein | GGADHKLB_03146 | Not Available | + | 3292952 - 3293215 | 10569.4 |
| abc transporter permease ytrf | GGADHKLB_03147 | O35005 | - | 3293946 - 3295358 | 50733.7 |
| hypothetical protein | GGADHKLB_03148 | Not Available | - | 3295324 - 3296817 | 52654.0 |
| macrolide export atp-binding/permease protein macb | GGADHKLB_03149 | Q9WYI7 | - | 3296821 - 3297534 | 26802.8 |
| Trna-gly | Not Available | Not Available | + | 3297656 - 3297727 | Not Available |
| hypothetical protein | GGADHKLB_03151 | Not Available | + | 3297801 - 3298097 | 11505.7 |
| hypothetical protein | GGADHKLB_03152 | P40730 | - | 3298128 - 3299768 | 58916.5 |
| hypothetical protein | GGADHKLB_03153 | C0H450 | - | 3299845 - 3300201 | 12488.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.