Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-proline reductase proprotein prda | GGADHKLB_03123 | Q9Z4P6 | - | 3270084 - 3270851 | 28650.4 |
| d-proline reductase subunit gamma | GGADHKLB_03124 | Q9Z4Q7 | - | 3271259 - 3271711 | 16225.4 |
| hypothetical protein | GGADHKLB_03125 | Not Available | - | 3271714 - 3271971 | 9911.82 |
| d-proline reductase proprotein prda | GGADHKLB_03126 | Q9Z4P6 | - | 3272029 - 3273882 | 65941.1 |
| ion-translocating oxidoreductase complex subunit c | GGADHKLB_03127 | Q9XDM9 | - | 3274031 - 3275359 | 47416.9 |
| proline racemase | GGADHKLB_03129 | Q17ZY4 | + | 3275899 - 3276933 | 37545.4 |
| hypothetical protein | GGADHKLB_03130 | O07001 | + | 3277030 - 3277617 | 22864.3 |
| hypothetical protein | GGADHKLB_03131 | Not Available | - | 3277755 - 3277991 | 8649.62 |
| hypothetical protein | GGADHKLB_03132 | Not Available | - | 3277994 - 3278197 | 7373.9 |
| hypothetical protein | GGADHKLB_03133 | Not Available | - | 3278248 - 3279345 | 37756.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.