Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | GGADHKLB_00179 | Not Available | - | 192704 - 193306 | 23938.3 |
| oligopeptide-binding protein appa | GGADHKLB_00180 | P06109 | + | 193520 - 195148 | 60553.6 |
| oligopeptide transport system permease protein oppb | GGADHKLB_00181 | P42062 | + | 195148 - 196143 | 35915.9 |
| dipeptide transport system permease protein dppc | GGADHKLB_00182 | P26904 | + | 196140 - 196964 | 29418.3 |
| oligopeptide transport atp-binding protein oppd | GGADHKLB_00183 | P76027 | + | 196976 - 197893 | 34256.8 |
| putative d,d-dipeptide transport atp-binding protein ddpf | GGADHKLB_00184 | A5VU86 | + | 197982 - 198602 | 23733.8 |
| multidrug export protein mepa | GGADHKLB_00185 | Q49VC5 | + | 198675 - 200072 | 49802.1 |
| hypothetical protein | GGADHKLB_00186 | Not Available | + | 200047 - 200685 | 23469.0 |
| hypothetical protein | GGADHKLB_00187 | Not Available | + | 200757 - 201875 | 42313.0 |
| d-proline reductase proprotein prda | GGADHKLB_00188 | Q9Z4P6 | + | 202145 - 202900 | 27814.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.