Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03063 | Not Available | - | 3224853 - 3224978 | 4846.22 |
| hydroxyacylglutathione hydrolase | GGADHKLB_03064 | Q49649 | - | 3224996 - 3225703 | 25654.4 |
| ribose import permease protein rbsc | GGADHKLB_03065 | P36948 | - | 3225700 - 3226674 | 34170.3 |
| galactose/methyl galactoside import atp-binding protein mgla | GGADHKLB_03066 | Q8RBQ1 | - | 3226693 - 3228186 | 55091.3 |
| hypothetical protein | GGADHKLB_03067 | P77269 | - | 3228226 - 3229212 | 34458.7 |
| hypothetical protein | GGADHKLB_03068 | Not Available | - | 3229232 - 3229903 | 25700.4 |
| hypothetical protein | GGADHKLB_03069 | Not Available | - | 3229920 - 3230591 | 25434.1 |
| levodione reductase | GGADHKLB_03070 | Q9X248 | - | 3230614 - 3231402 | 27747.1 |
| transcriptional regulator lsrr | GGADHKLB_03071 | Q57HE3 | + | 3231571 - 3232530 | 35724.1 |
| glutamine transport atp-binding protein glnq | GGADHKLB_03072 | O34677 | - | 3232625 - 3233371 | 27746.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.