Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03032 | Not Available | - | 3193395 - 3194267 | 34829.9 |
| uroporphyrinogen decarboxylase | GGADHKLB_03033 | P58869 | + | 3194619 - 3195683 | 39154.8 |
| putative abc transporter atp-binding protein ybit | GGADHKLB_03034 | O34512 | + | 3195802 - 3197358 | 59028.9 |
| nadh oxidase | GGADHKLB_03035 | P32382 | - | 3197406 - 3199322 | 69406.9 |
| sdr family nad(p)-dependent oxidoreductase | GGADHKLB_03036 | P25145 | - | 3199342 - 3200184 | 30911.5 |
| hypothetical protein | GGADHKLB_03038 | P40950 | + | 3200387 - 3200944 | 21380.7 |
| uroporphyrinogen decarboxylase | GGADHKLB_03039 | Q48949 | - | 3200973 - 3202091 | 41328.7 |
| na(+)-translocating nadh-quinone reductase subunit f | GGADHKLB_03040 | P0DX10 | - | 3202145 - 3203746 | 57822.1 |
| uroporphyrinogen decarboxylase | GGADHKLB_03041 | P58869 | - | 3203748 - 3204764 | 37063.3 |
| methionine synthase | GGADHKLB_03042 | Q8TS71 | - | 3204781 - 3205431 | 23720.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.