Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_03022 | Q24YJ4 | - | 3182134 - 3183411 | 45502.8 |
| hypothetical protein | GGADHKLB_03023 | P42978 | - | 3183437 - 3184294 | 30879.0 |
| protein yhgf | GGADHKLB_03024 | O31489 | - | 3184324 - 3186480 | 80431.4 |
| hth-type transcriptional regulator mtrr | GGADHKLB_03025 | P39897 | + | 3186704 - 3187306 | 23159.7 |
| putative lipid kinase ytlr | GGADHKLB_03026 | O34799 | + | 3187340 - 3188263 | 34235.1 |
| hypothetical protein | GGADHKLB_03027 | P54527 | + | 3188284 - 3189099 | 31466.8 |
| hypothetical protein | GGADHKLB_03028 | Not Available | + | 3189198 - 3189866 | 25869.2 |
| bacteriohemerythrin | GGADHKLB_03029 | B2FJ68 | + | 3189894 - 3190316 | 16771.4 |
| sugar fermentation stimulation protein a | GGADHKLB_03030 | P83847 | - | 3190379 - 3192136 | 66914.8 |
| hypothetical protein | GGADHKLB_03031 | Not Available | - | 3192133 - 3193257 | 44086.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.