Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| [ribosomal protein s18]-alanine n-acetyltransferase | GGADHKLB_03012 | P0A946 | - | 3174236 - 3174679 | 16597.0 |
| low specificity l-threonine aldolase | GGADHKLB_03013 | O50584 | - | 3174681 - 3175715 | 38252.5 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | GGADHKLB_03014 | O05516 | - | 3175708 - 3176433 | 26393.9 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | GGADHKLB_03015 | O05515 | - | 3176421 - 3176846 | 16036.9 |
| hypothetical protein | GGADHKLB_03016 | Not Available | - | 3176862 - 3177377 | 19054.9 |
| lactoylglutathione lyase | GGADHKLB_03017 | P0A0T2 | + | 3177524 - 3177892 | 14083.7 |
| riboflavin transporter ribu | GGADHKLB_03018 | P50726 | - | 3177967 - 3178596 | 22077.2 |
| n-((2s)-2-amino-2-carboxyethyl)-l-glutamate dehydrogenase | GGADHKLB_03019 | P33728 | - | 3178929 - 3179981 | 38877.4 |
| multidrug-efflux transporter 1 regulator | GGADHKLB_03020 | P96690 | - | 3180090 - 3180905 | 31883.9 |
| hypothetical protein | GGADHKLB_03021 | P43006 | - | 3180950 - 3182110 | 40777.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.