Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | + | 3168426 - 3168498 | Not Available |
| Trna-ile | Not Available | Not Available | + | 3168629 - 3168702 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 3168741 - 3168858 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 3168963 - 3170485 | Not Available |
| Trna-ser | Not Available | Not Available | + | 3170816 - 3170905 | Not Available |
| Trna-ser | Not Available | Not Available | + | 3170983 - 3171068 | Not Available |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | GGADHKLB_03008 | C4Z312 | - | 3171159 - 3171893 | 27830.5 |
| trna n6-adenosine threonylcarbamoyltransferase | GGADHKLB_03009 | C3KUS7 | - | 3171915 - 3172943 | 36745.8 |
| ribonuclease z | GGADHKLB_03010 | A9KSU3 | - | 3172979 - 3173887 | 33858.9 |
| hypothetical protein | GGADHKLB_03011 | Not Available | - | 3173896 - 3174129 | 9204.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.