Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-proline reductase proprotein prda | GGADHKLB_02992 | Q9Z4P6 | - | 3152440 - 3153885 | 52679.9 |
| hypothetical protein | GGADHKLB_02993 | P37499 | + | 3154178 - 3155077 | 33679.5 |
| biosynthetic peptidoglycan transglycosylase | GGADHKLB_02994 | P38050 | - | 3155099 - 3155899 | 30609.9 |
| hypothetical protein | GGADHKLB_02995 | P44252 | - | 3155955 - 3158534 | 94193.2 |
| lipoprotein-releasing system atp-binding protein lold | GGADHKLB_02996 | Q58903 | - | 3158534 - 3159220 | 25367.8 |
| sensor histidine kinase rcsc | GGADHKLB_02997 | Q7MD16 | - | 3159412 - 3161967 | 96822.6 |
| hypothetical protein | GGADHKLB_02998 | O32156 | - | 3161983 - 3163275 | 48061.6 |
| hypothetical protein | GGADHKLB_02999 | P94412 | - | 3163433 - 3164944 | 56840.9 |
| Trna-asn | Not Available | Not Available | + | 3165083 - 3165154 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 3165302 - 3168197 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.