Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| delta(1)-pyrroline-2-carboxylate reductase | GGADHKLB_02982 | Q63FA5 | - | 3143058 - 3144044 | 35393.4 |
| hypothetical protein | GGADHKLB_02983 | A9CH00 | - | 3144062 - 3144475 | 14530.7 |
| hypothetical protein | GGADHKLB_02984 | Q9I485 | - | 3144479 - 3145732 | 45929.9 |
| hth-type transcriptional activator cmpr | GGADHKLB_02985 | O32255 | + | 3145850 - 3146728 | 33670.8 |
| delta(1)-pyrroline-2-carboxylate reductase | GGADHKLB_02986 | Q63FA5 | - | 3146783 - 3147766 | 35396.9 |
| proline racemase | GGADHKLB_02987 | Q17ZY4 | - | 3147781 - 3148818 | 38201.5 |
| dihydroxy-acid dehydratase | GGADHKLB_02988 | Q8RDJ9 | - | 3148837 - 3150531 | 61218.1 |
| hypothetical protein | GGADHKLB_02989 | Not Available | - | 3150567 - 3151454 | 30981.6 |
| d-proline reductase subunit gamma | GGADHKLB_02990 | Q9Z4Q7 | - | 3151749 - 3152207 | 17099.5 |
| hypothetical protein | GGADHKLB_02991 | Not Available | - | 3152204 - 3152443 | 9042.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.