Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fructosamine deglycase frlb | GGADHKLB_02972 | O32157 | - | 3130240 - 3131220 | 36942.9 |
| hth-type transcriptional repressor nagr | GGADHKLB_02973 | O34817 | - | 3131499 - 3132227 | 27470.2 |
| hypothetical protein | GGADHKLB_02974 | Not Available | + | 3132395 - 3133582 | 43521.6 |
| benzylsuccinate synthase activating enzyme | GGADHKLB_02975 | Q727N0 | - | 3133590 - 3134567 | 36457.0 |
| choline trimethylamine-lyase | GGADHKLB_02976 | P32674 | - | 3134572 - 3136836 | 86285.4 |
| putative zinc-type alcohol dehydrogenase-like protein yjmd | GGADHKLB_02977 | Q5JI69 | - | 3136849 - 3137862 | 36647.7 |
| hth-type transcriptional activator rhas | GGADHKLB_02978 | Q51872 | - | 3137902 - 3138639 | 28116.7 |
| nadp-reducing hydrogenase subunit hndd | GGADHKLB_02979 | Q46508 | - | 3138833 - 3140515 | 62204.5 |
| hypothetical protein | GGADHKLB_02980 | Q46507 | - | 3140528 - 3142408 | 68495.9 |
| nadp-reducing hydrogenase subunit hnda | GGADHKLB_02981 | P19234 | - | 3142411 - 3142884 | 17361.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.