Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_02962 | Not Available | + | 3120461 - 3122158 | 65161.6 |
| hypothetical protein | GGADHKLB_02963 | Not Available | - | 3122318 - 3122506 | 7578.2 |
| hypothetical protein | GGADHKLB_02964 | O34378 | - | 3122653 - 3123270 | 22761.0 |
| fructosamine deglycase frlb | GGADHKLB_02965 | O32157 | - | 3123322 - 3124302 | 36932.2 |
| fructoselysine 3-epimerase | GGADHKLB_02966 | Q83JB2 | - | 3124306 - 3125148 | 31388.6 |
| diacetylchitobiose uptake system permease protein ngcg | GGADHKLB_02967 | O32154 | - | 3125158 - 3125979 | 30564.4 |
| melibiose/raffinose/stachyose import permease protein meld | GGADHKLB_02968 | O32155 | - | 3125991 - 3126872 | 32761.6 |
| multiple sugar-binding protein | GGADHKLB_02969 | O32156 | - | 3126957 - 3128252 | 47816.3 |
| fructosamine kinase frld | GGADHKLB_02970 | O32153 | - | 3128285 - 3129172 | 32461.4 |
| hth-type transcriptional repressor nagr | GGADHKLB_02971 | O34817 | - | 3129368 - 3130096 | 27090.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.