Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase iscs | GGADHKLB_02932 | B8DZS1 | - | 3084948 - 3086234 | 47948.5 |
| nadh-dependent butanol dehydrogenase a | GGADHKLB_02933 | Q04944 | - | 3086418 - 3087590 | 43289.5 |
| cinnamate reductase | GGADHKLB_02934 | G9F1Y9 | - | 3087631 - 3089622 | 72383.5 |
| lactaldehyde reductase | GGADHKLB_02935 | B1VB76 | - | 3089638 - 3090786 | 43035.1 |
| hypothetical protein | GGADHKLB_02936 | Not Available | - | 3090801 - 3092042 | 45136.1 |
| hth-type transcriptional regulator gltc | GGADHKLB_02937 | P37499 | - | 3092302 - 3093204 | 33938.9 |
| hypothetical protein | GGADHKLB_02938 | P42109 | - | 3093236 - 3093613 | 13587.7 |
| hypothetical protein | GGADHKLB_02939 | Q58004 | - | 3094231 - 3095247 | 36544.3 |
| hypothetical protein | GGADHKLB_02940 | Q58721 | - | 3095331 - 3095627 | 11050.4 |
| hypothetical protein | GGADHKLB_02941 | P94412 | - | 3095773 - 3097140 | 49912.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.