Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_02922 | O31473 | + | 3080574 - 3081152 | 20928.3 |
| Trna-leu | Not Available | Not Available | + | 3081243 - 3081329 | Not Available |
| Trna-val | Not Available | Not Available | + | 3081333 - 3081405 | Not Available |
| Trna-asp | Not Available | Not Available | + | 3081514 - 3081587 | Not Available |
| Trna-met | Not Available | Not Available | + | 3081594 - 3081667 | Not Available |
| Trna-thr | Not Available | Not Available | + | 3081696 - 3081768 | Not Available |
| Trna-glu | Not Available | Not Available | + | 3081779 - 3081850 | Not Available |
| hypothetical protein | GGADHKLB_02929 | Not Available | - | 3081962 - 3082636 | 25416.7 |
| hth-type transcriptional regulator murr | GGADHKLB_02930 | A8ADG3 | + | 3082785 - 3083648 | 31979.3 |
| c4-dicarboxylate transport protein | GGADHKLB_02931 | O59010 | - | 3083715 - 3084935 | 43376.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.