Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | + | 3061845 - 3061930 | Not Available |
| pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase | GGADHKLB_02903 | P73846 | - | 3062206 - 3063027 | 30920.4 |
| pyridinium-3,5-biscarboxylic acid mononucleotide synthase | GGADHKLB_02904 | F9UST0 | - | 3063024 - 3063791 | 27517.1 |
| hypothetical protein | GGADHKLB_02905 | Not Available | - | 3063812 - 3064135 | 13215.7 |
| hypothetical protein | GGADHKLB_02906 | O34647 | + | 3064245 - 3064475 | 9045.78 |
| hypothetical protein | GGADHKLB_02907 | B7IFM6 | - | 3064567 - 3065133 | 21177.6 |
| hypothetical protein | GGADHKLB_02908 | Not Available | - | 3065256 - 3065426 | 6719.09 |
| fatty acid abc transporter atp-binding/permease protein | GGADHKLB_02909 | P63398 | - | 3065453 - 3067306 | 68041.2 |
| putative abc transporter atp-binding protein | GGADHKLB_02910 | P9WQJ0 | - | 3067303 - 3069030 | 63854.6 |
| hypothetical protein | GGADHKLB_02911 | Not Available | - | 3069086 - 3069271 | 7319.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.