Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_00159 | Not Available | + | 167875 - 168789 | 32749.3 |
| 16s ribosomal rna | Not Available | Not Available | + | 169159 - 170683 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 170788 - 170905 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 171306 - 174199 | Not Available |
| Trna-asn | Not Available | Not Available | + | 174346 - 174417 | Not Available |
| hypothetical protein | GGADHKLB_00164 | Not Available | + | 174637 - 175443 | 31478.5 |
| sucrose-6-phosphate hydrolase | GGADHKLB_00165 | P40714 | + | 175644 - 177128 | 57232.4 |
| hth-type transcriptional regulator dega | GGADHKLB_00166 | Q9K6K2 | + | 177157 - 178137 | 36789.2 |
| (r)-2-hydroxyglutaryl-coa dehydratase activating atpase | GGADHKLB_00167 | P11568 | + | 178288 - 179046 | 27215.7 |
| (r)-phenyllactyl-coa dehydratase beta subunit | GGADHKLB_00168 | P39384 | + | 179062 - 180210 | 43193.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.