Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_02872 | P96690 | - | 3029402 - 3030247 | 33034.6 |
| hypothetical protein | GGADHKLB_02873 | P44263 | - | 3030644 - 3032044 | 49545.9 |
| alanine dehydrogenase | GGADHKLB_02874 | Q6LX40 | - | 3032072 - 3033238 | 41896.2 |
| hypothetical protein | GGADHKLB_02875 | Not Available | - | 3033336 - 3035123 | 67588.9 |
| hypothetical protein | GGADHKLB_02876 | Not Available | - | 3035108 - 3036652 | 58823.2 |
| pyrophosphate--fructose 6-phosphate 1-phosphotransferase | GGADHKLB_02877 | E1VB09 | - | 3037417 - 3038664 | 45411.3 |
| hypothetical protein | GGADHKLB_02878 | Not Available | - | 3038745 - 3039101 | 12834.6 |
| thioredoxin reductase | GGADHKLB_02879 | Q59160 | - | 3039112 - 3040098 | 35813.6 |
| l-2-hydroxyglutarate dehydrogenase | GGADHKLB_02880 | A0A0R3K2G2 | - | 3040112 - 3041545 | 52172.2 |
| glycerol kinase | GGADHKLB_02881 | C4ZGB4 | - | 3041549 - 3043048 | 55529.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.