Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ecf rna polymerase sigma factor sigm | GGADHKLB_02852 | O07582 | + | 3003639 - 3004115 | 18842.9 |
| hypothetical protein | GGADHKLB_02853 | O07628 | + | 3004112 - 3004936 | 31796.4 |
| l-lysine 2,3-aminomutase | GGADHKLB_02854 | O67554 | + | 3005091 - 3006182 | 41437.0 |
| isopentenyl-diphosphate delta-isomerase | GGADHKLB_02855 | P59659 | - | 3006257 - 3007282 | 39210.9 |
| hypothetical protein | GGADHKLB_02856 | Q9HYT3 | - | 3007279 - 3009162 | 72342.2 |
| hypothetical protein | GGADHKLB_02857 | P16271 | - | 3009295 - 3011040 | 63551.1 |
| rubrerythrin-1 | GGADHKLB_02858 | Q97FZ9 | - | 3011065 - 3011676 | 23504.8 |
| hypothetical protein | GGADHKLB_02859 | Q9ZDI9 | - | 3011738 - 3012754 | 39874.7 |
| pyrophosphate--fructose 6-phosphate 1-phosphotransferase | GGADHKLB_02860 | E1VB09 | + | 3012909 - 3014132 | 44687.4 |
| hypothetical protein | GGADHKLB_02861 | O34920 | - | 3014191 - 3015150 | 36352.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.