Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease protein natb | GGADHKLB_02832 | P46904 | - | 2986087 - 2987295 | 44193.5 |
| abc transporter atp-binding protein nata | GGADHKLB_02833 | P46903 | - | 2987296 - 2988069 | 29096.0 |
| ferredoxin | GGADHKLB_02834 | P46797 | - | 2988216 - 2988401 | 6446.39 |
| carbamate kinase 1 | GGADHKLB_02835 | Q46807 | - | 2988465 - 2989394 | 33953.1 |
| hypothetical protein | GGADHKLB_02836 | Not Available | - | 2989498 - 2990076 | 20361.2 |
| hypothetical protein | GGADHKLB_02837 | Q60313 | + | 2990278 - 2990802 | 20014.9 |
| hypothetical protein | GGADHKLB_02838 | Not Available | - | 2990846 - 2991082 | 8796.66 |
| hypothetical protein | GGADHKLB_02839 | Not Available | - | 2991204 - 2993963 | 100770.0 |
| Trna-pro | Not Available | Not Available | + | 2994136 - 2994210 | Not Available |
| 4-hydroxy-tetrahydrodipicolinate reductase | GGADHKLB_02841 | A5W9A1 | + | 2994354 - 2995151 | 29002.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.