Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_02812 | Not Available | - | 2965203 - 2965352 | 5619.67 |
| hypothetical protein | GGADHKLB_02813 | P77510 | - | 2965375 - 2966700 | 51530.2 |
| sensory transduction protein lytr | GGADHKLB_02814 | Q2YV67 | - | 2966700 - 2967413 | 27709.8 |
| hypothetical protein | GGADHKLB_02815 | Not Available | - | 2967423 - 2967977 | 22010.8 |
| hypothetical protein | GGADHKLB_02816 | C1CYP4 | + | 2968107 - 2968427 | 11986.7 |
| thioredoxin reductase | GGADHKLB_02817 | P50971 | - | 2968547 - 2969461 | 32259.7 |
| hypothetical protein | GGADHKLB_02818 | P43752 | - | 2969487 - 2971853 | 89237.7 |
| 7-carboxy-7-deazaguanine synthase | GGADHKLB_02819 | Q58624 | - | 2972014 - 2972706 | 25701.8 |
| hypothetical protein | GGADHKLB_02820 | P0A0N3 | - | 2972719 - 2973306 | 22824.4 |
| acylphosphatase | GGADHKLB_02821 | Q0TNY8 | - | 2973348 - 2973617 | 10284.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.