Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] scindens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecum; colon; distal intestine; feces; GI tract; gut; gut microbiome; ileum; large intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Chains; Chains, Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium scindens
Accession NumberCP113781.1
Gene Summary
Adenine Count
1027942 bp
Thymine Count
1059284 bp
Guanine Count
939860 bp
Cytosine Count
955966 bp
Genome Length
3983052 bp
Protein-coding Genes
3637 genes
Non-Coding Genes
144 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GGADHKLB_02782 | P72873 | - | 2928440 - 2929213 | 29700.6 |
| pyruvate:ferredoxin oxidoreductase | GGADHKLB_02783 | P19543 | - | 2929474 - 2933007 | 127522.0 |
| hypothetical protein | GGADHKLB_02784 | P45320 | + | 2933312 - 2934700 | 50368.6 |
| hypothetical protein | GGADHKLB_02785 | P94394 | - | 2934798 - 2935739 | 36316.8 |
| hypothetical protein | GGADHKLB_02786 | P29937 | - | 2935767 - 2936828 | 39663.7 |
| putative k(+)-stimulated pyrophosphate-energized sodium pump | GGADHKLB_02787 | Q898Q9 | - | 2936996 - 2938978 | 67689.0 |
| trna pseudouridine synthase a | GGADHKLB_02788 | B0KCN3 | - | 2939201 - 2939956 | 28436.3 |
| energy-coupling factor transporter transmembrane protein ecft | GGADHKLB_02789 | A5N4S9 | - | 2939996 - 2940820 | 31214.6 |
| energy-coupling factor transporter atp-binding protein ecfa2 | GGADHKLB_02790 | Q890R3 | - | 2940817 - 2941671 | 32021.7 |
| energy-coupling factor transporter atp-binding protein ecfa1 | GGADHKLB_02791 | A0PXX7 | - | 2941656 - 2942507 | 31639.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.